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- @book{Dominik201408,
- keywords = {org-mode},
- url = {http://amazon.com/o/ASIN/9881327709/},
- isbn = 9789881327703,
- year = 2014,
- publisher = {Samurai Media Limited},
- author = {Carsten Dominik},
- title = {The Org Mode 8 Reference Manual - Organize your life with GNU
- Emacs},
- }
- @article{xu-2015-relat-between,
- title = {Relationships Between the Surface Electronic and Chemical
- Properties of Doped 4d and 5d Late Transition Metal Dioxides},
- eid = 104703,
- url =
- "http://scitation.aip.org/content/aip/journal/jcp/142/10/10.1063/1.4914093",
- doi = {10.1063/1.4914093},
- year = 2015,
- pages = 104703,
- number = 10,
- volume = 142,
- journal = "The Journal of Chemical Physics",
- keywords = {DESC0004031, early-career, orgmode},
- author = "Xu, Zhongnan and Kitchin, John R.",
- }
-
- @article{xu-2015-linear-respon,
- title = {A Linear Response {DFT}+{U} Study of Trends in the Oxygen
- Evolution Activity of Transition Metal Rutile Dioxides},
- eprint = { http://dx.doi.org/10.1021/jp511426q },
- url = { http://dx.doi.org/10.1021/jp511426q },
- doi = {10.1021/jp511426q},
- year = 2015,
- pages = {4827-4833},
- number = 9,
- volume = 119,
- journal = {The Journal of Physical Chemistry C},
- keywords = {DESC0004031, early-career, orgmode, },
- author = {Xu, Zhongnan and Rossmeisl, Jan and Kitchin, John R.},
- }
-
- @article{boes-2015-suppor-infor,
- title = {Supporting Information: Estimating Bulk-Composition-Dependent
- \ce{H2} Adsorption Energies on \ce{Cu_{x}Pd_{1-x}} Alloy (111)
- Surfaces},
- url =
- {http://pubs.acs.org/doi/suppl/10.1021/cs501585k/suppl_file/cs501585k_si_001.pdf},
- doi = {10.1021/cs501585k},
- year = 2015,
- pages = {1020-1026},
- volume = 5,
- journal = {ACS Catalysis},
- keywords = {orgmode},
- author = {Jacob R. Boes and Gamze Gumuslu and James B. Miller and Andrew
- J. Gellman and John R. Kitchin},
- }
-
- @article{boes-2015-estim-bulk,
- title = {Estimating Bulk-Composition-Dependent \ce{H2} Adsorption
- Energies on \ce{Cu_{x}Pd_{1-x}} Alloy (111) Surfaces},
- url = {http://dx.doi.org/10.1021/cs501585k},
- doi = {10.1021/cs501585k},
- year = 2015,
- pages = {1020-1026},
- volume = 5,
- keywords = {orgmode},
- journal = {ACS Catalysis},
- author = {Jacob R. Boes and Gamze Gumuslu and James B. Miller and Andrew
- J. Gellman and John R. Kitchin},
- }
-
- @article{curnan-2014-effec-concen,
- title = {Effects of Concentration, Crystal Structure, Magnetism, and
- Electronic Structure Method on First-Principles Oxygen Vacancy
- Formation Energy Trends in Perovskites},
- eprint = { http://dx.doi.org/10.1021/jp507957n },
- url = {http://dx.doi.org/10.1021/jp507957n},
- doi = {10.1021/jp507957n},
- year = 2014,
- pages = {28776-28790},
- number = 49,
- volume = 118,
- journal = {The Journal of Physical Chemistry C},
- keywords = {orgmode, },
- author = {Curnan, Matthew T. and Kitchin, John R.},
- }
-
- @article{miller-2014-simul-temper,
- title = {Simulating Temperature Programmed Desorption of Oxygen on
- {P}t(111) Using {DFT} Derived Coverage Dependent Desorption
- Barriers},
- url = {http://dx.doi.org/10.1007/s11244-013-0166-3},
- doi = {10.1007/s11244-013-0166-3},
- year = 2014,
- pages = {106-117},
- number = {1-4},
- volume = 57,
- journal = {Topics in Catalysis},
- keywords = {DESC0004031, early-career, orgmode, },
- author = {Spencer D. Miller and Vladimir V. Pushkarev and Andrew
- J. Gellman and John R. Kitchin},
- }
-
- @article{xu-2014-probin-cover,
- title = {Probing the Coverage Dependence of Site and Adsorbate
- Configurational Correlations on (111) Surfaces of Late
- Transition Metals},
- url = {http://dx.doi.org/10.1021/jp508805h},
- doi = {10.1021/jp508805h},
- year = 2014,
- pages = {25597-25602},
- number = 44,
- volume = 118,
- journal = {J. Phys. Chem. C},
- keywords = {DESC0004031, early-career, orgmode, },
- author = {Zhongnan Xu and John R. Kitchin},
- }
-
- @article{xu-2014-relat-elect,
- title = {Relating the Electronic Structure and Reactivity of the 3d
- Transition Metal Monoxide Surfaces},
- abstract = "Abstract We performed a series of density functional theory
- calculations of dissociative oxygen adsorption on fcc metals
- and their corresponding rocksalt monoxides to elucidate the
- relationship between the oxide electronic structure and its
- corresponding reactivity. We decomposed the dissociative
- adsorption energy of oxygen on an oxide surface into a sum of
- the adsorption energy on the metal and a change in adsorption
- energy caused by both expanding and oxidizing the lattice. We
- were able to identify the key features of the electronic
- structure that explains the trends in adsorption energies on
- 3d transition metal monoxide surfaces. ",
- issn = "1566-7367",
- url = {http://dx.doi.org/10.1016/j.catcom.2013.10.028},
- doi = {10.1016/j.catcom.2013.10.028},
- year = 2014,
- pages = {60-64},
- volume = 52,
- journal = {Catalysis Communications},
- keywords = {DESC0004031, early-career, orgmode, },
- author = {Zhongnan Xu and John R. Kitchin},
- }
-
- @article{mehta-2014-ident-poten,
- title = {Identifying Potential \ce{BO2} Oxide Polymorphs for Epitaxial
- Growth Candidates},
- eprint = {http://pubs.acs.org/doi/pdf/10.1021/am4059149},
- url = {http://dx.doi.org/10.1021/am4059149},
- doi = {10.1021/am4059149},
- year = 2014,
- pages = {3630-3639},
- number = 5,
- volume = 6,
- journal = {ACS Appl. Mater. Interfaces},
- keywords = {orgmode, },
- author = {Prateek Mehta and Paul A. Salvador and John R. Kitchin},
- }
-
- @article{hallenbeck-2013-effec,
- title = {Effects of \ce{O_2} and \ce{SO_2} on the Capture Capacity of a
- Primary-Amine Based Polymeric \ce{CO_2} Sorbent},
- eprint = "http://pubs.acs.org/doi/pdf/10.1021/ie400582a",
- url = "http://pubs.acs.org/doi/abs/10.1021/ie400582a",
- doi = "10.1021/ie400582a",
- year = 2013,
- pages = "10788-10794",
- journal = "Industrial \& Engineering Chemistry Research",
- keywords = {RUA, orgmode},
- author = "Hallenbeck, Alexander P. and Kitchin, John R.",
- }
-
-
- @article{kitchin-2016-autom-data,
- abstract = "In the current scientific publishing landscape, there is a
- need for an authoring workflow that easily integrates data and
- code into manuscripts and that enables the data and code to be
- published in reusable form. Automated embedding of data and
- code into published output will enable superior communication
- and data archiving. In this work, we demonstrate a proof of
- concept for a workflow, org-mode, which successfully provides
- this authoring capability and workflow integration. We
- illustrate this concept in a series of examples for potential
- uses of this workflow. First, we use data on citation counts
- to compute the h-index of an author, and show two code
- examples for calculating the h-index. The source for each
- example is automatically embedded in the PDF during the export
- of the document. We demonstrate how data can be embedded in
- image files, which themselves are embedded in the document.
- Finally, metadata about the embedded files can be
- automatically included in the exported PDF, and accessed by
- computer programs. In our customized export, we embedded
- metadata about the attached files in the PDF in an Info field.
- A computer program could parse this output to get a list of
- embedded files and carry out analyses on them. Authoring tools
- such as Emacs + org-mode can greatly facilitate the
- integration of data and code into technical writing. These
- tools can also automate the embedding of data into document
- formats intended for consumption.",
- author = "Kitchin, John R. and Van Gulick, Ana E. and Zilinski, Lisa D.",
- keywords = {orgmode},
- doi = "10.1007/s00799-016-0173-7",
- issn = "1432-1300",
- journal = "International Journal on Digital Libraries",
- pages = "1--6",
- title = {Automating Data Sharing Through Authoring Tools},
- url = "http://dx.doi.org/10.1007/s00799-016-0173-7",
- year = 2016,
- }
-
- @article{kitchin-2015-data-surfac-scien,
- author = "John R. Kitchin",
- title = {Data Sharing in Surface Science},
- journal = "Surface Science ",
- volume = {647},
- pages = {103-107},
- year = 2015,
- doi = {10.1016/j.susc.2015.05.007},
- url =
- "http://www.sciencedirect.com/science/article/pii/S0039602815001326",
- issn = "0039-6028",
- keywords = {DESC0004031, early-career, orgmode, Data sharing },
- }
-
- @article{kitchin-2015-examp,
- author = {Kitchin, John R.},
- title = {Examples of Effective Data Sharing in Scientific Publishing},
- journal = {ACS Catalysis},
- volume = {5},
- number = {6},
- pages = {3894-3899},
- year = 2015,
- doi = {10.1021/acscatal.5b00538},
- url = { http://dx.doi.org/10.1021/acscatal.5b00538 },
- keywords = {DESC0004031, early-career, orgmode, Data sharing },
- eprint = { http://dx.doi.org/10.1021/acscatal.5b00538 },
- }
-
- @online{jkitchin76:online,
- title = {jkitchin/org-ref: org-mode modules for citations,
- cross-references, bibliographies in org-mode and useful bibtex
- tools to go with it.},
- url = {https://github.com/jkitchin/org-ref},
- urldate = {12/04/2016}
- }
-
- @book{chen-2006-handb-data-visual,
- author = {Hrsg. Chun-houh Chen ; Hrsg. Wolfgang H{\"a}rdle ; Hrsg.
- Antony Unwin},
- title = {Handbook of Data Visualization},
- year = 2006,
- publisher = {Springer Berlin},
- url = {http://www.worldcat.org/oclc/150289486?referer=xid},
- city = {Berlin},
- ed = {1. Ed.},
- form = {BA},
- isbn = 9783540330363,
- lang = {eng},
- lccn = 2007931825,
- oclcnum = {150289486 214357554 232302403 314615038 474712418 494787249
- 645208009 743424036 751135412 76799021 804152581 849253364
- 873514520 612218650},
- }
-
- @article{geng-2017-first-princ,
- author = {Feiyang Geng and Jacob R. Boes and John R. Kitchin},
- title = {First-Principles Study of the {Cu-Pd} Phase Diagram},
- journal = {Calphad},
- volume = 56,
- pages = {224-229},
- year = 2017,
- doi = {10.1016/j.calphad.2017.01.009},
- url = {https://doi.org/10.1016/j.calphad.2017.01.009},
- DATE_ADDED = {Wed Feb 22 09:13:55 2017},
- }
-
- @article{boes-2017-model-segreg,
- author = {Boes, Jacob Russell and Kitchin, John R.},
- title = {Modeling Segregation on {AuPd}(111) Surfaces With Density
- Functional Theory and Monte Carlo Simulations},
- journal = {The Journal of Physical Chemistry C},
- volume = {121},
- number = {6},
- pages = {3479-3487},
- year = 2017,
- doi = {10.1021/acs.jpcc.6b12752},
- url = {https://doi.org/10.1021/acs.jpcc.6b12752},
- eprint = { http://dx.doi.org/10.1021/acs.jpcc.6b12752 },
- }
-
- @article{xu-2017-first-princ,
- author = {Xu, Zhongnan and Salvador, Paul A. and Kitchin, John R.},
- title = {First-Principles Investigation of the Epitaxial Stabilization
- of Oxide Polymorphs: \ce{TiO2} on \ce{(Sr,Ba)TiO3}},
- journal = {ACS Applied Materials \& Interfaces},
- volume = {9},
- number = {4},
- pages = {4106-4118},
- year = 2017,
- doi = {10.1021/acsami.6b11791},
- url = {https://doi.org/10.1021/acsami.6b11791},
- eprint = { http://dx.doi.org/10.1021/acsami.6b11791 },
- note = {PMID: 28004912},
- }
-
- @article{boes-2017-neural-networ,
- author = {Jacob R. Boes and John R. Kitchin},
- title = {Neural Network Predictions of Oxygen Interactions on a Dynamic
- {Pd} Surface},
- journal = {Molecular Simulation},
- pages = {1-9},
- year = 2017,
- doi = {10.1080/08927022.2016.1274984},
- url = {https://doi.org/10.1080/08927022.2016.1274984},
- keywords = {CBET-1506770, orgmode},
- }
-
-
- @article{boes-2016-neural-networ,
- author = {Jacob R. Boes and Mitchell C. Groenenboom and John A. Keith
- and John R. Kitchin},
- title = {Neural Network and {Reaxff} Comparison for {Au} Properties},
- journal = {Int. J. Quantum Chem.},
- volume = 116,
- number = 13,
- pages = {979-987},
- year = 2016,
- doi = {10.1002/qua.25115},
- url = {http://dx.doi.org/10.1002/qua.25115},
- issn = {1097-461X},
- keywords = {Kohn-Sham density functional theory, neural networks, reactive
- force fields, potential energy surfaces, machine learning},
- }
|