#### Essential functionality needed by ESS ## Should work on *all* vesions of R. ## Do not use _ in names, nor :: , nor 1L etc, as they ## cannot be parsed in old R versions .ess.getRversion <- function() { if(exists("getRversion", mode="function")) getRversion() else paste(R.version$major, R.version$minor, sep=".") } ## loading ESSR.rda might fail, so re-assign here: .ess.Rversion <- .ess.getRversion() .ess.R.has.utils <- (.ess.Rversion >= "1.9.0") .ess.utils.name <- paste("package", if(.ess.Rversion >= "1.9.0") "utils" else "base", sep = ":") ## Instead of modern utils::help use one that works in R 1.0.0: .ess.findFUN <- get("find", .ess.utils.name) ### HELP .ess.help <- function(..., help.type = getOption("help_type")) { if (is.null(help.type)) { help.type <- "text" } ## - get("help", ..) searching in global env works with devtools redefines ## - Redefining to .ess.help this way is necessary because ## utils:::print.help_files_with_topic (used internally when there's ## more than one a package) uses the quoted call ## MM: don't understand; more specifically? .ess.help <- function(...) { do.call(get("help", envir = .GlobalEnv), list(...)) } if (.ess.Rversion > "2.10") { ## Abbreviating help_type to avoid underscore .ess.help(..., help = help.type) } else { .ess.help(..., htmlhelp = help.type == "html") } } .ess.getHelpAliases <- function(){ readrds <- if(.ess.Rversion >= '2.13.0') readRDS else .readRDS rds.files <- paste(searchpaths(), "/help/aliases.rds", sep = "") unlist(lapply(rds.files, function(f){ if( file.exists(f) ) try(names(readrds(f))) }), use.names = FALSE) } ### SOURCING .ess.eval <- function(string, visibly = TRUE, output = FALSE, max.deparse.length = 300, file = tempfile("ESS"), local = NULL) { if (is.null(local)) { local <- if (.ess.Rversion > '2.13') parent.frame() else FALSE } ## create FILE, put string into it. Then source. ## arguments are like in source and .ess.source cat(string, file = file) ## The following on.exit infloops in R 3.3.0 ## https://github.com/emacs-ess/ESS/issues/334 ## https://bugs.r-project.org/bugzilla/show_bug.cgi?id=16971 ## So we are cleanning it in .ess.source instead. ## on.exit(file.remove(file)) .ess.source(file, visibly = visibly, output = output, max.deparse.length = max.deparse.length, local = local, fake.source = TRUE) } .ess.strip.error <- function(msg, srcfile) { pattern <- paste0(srcfile, ":[0-9]+:[0-9]+: ") sub(pattern, "", msg) } .ess.file.remove <- function(file){ if (base::file.exists(file)) base::file.remove(file) else FALSE } .ess.source <- function(file, visibly = TRUE, output = FALSE, max.deparse.length = 300, local = NULL, fake.source = FALSE, keep.source = TRUE, message.prefix = "") { if (is.null(local)) { local <- if (.ess.Rversion > "2.13") parent.frame() else FALSE } ss <- if (.ess.Rversion >= "3.4") base::source else if (.ess.Rversion >= "2.8") function(..., spaced) base::source(...) else function(..., spaced, keep.source) base::source(...) on.exit({ if (fake.source) .ess.file.remove(file) }) out <- ss(file, echo = visibly, local = local, print.eval = output, spaced = FALSE, max.deparse.length = max.deparse.length, keep.source = keep.source) if(!fake.source) cat(sprintf("%sSourced file %s\n", message.prefix, file)) ## Return value for org-babel invisible(out$value) } if(.ess.Rversion < "1.8") ## (works for "1.7.2"): bquote() was new in 1.8.0 bquote <- function(expr, where=parent.frame()){ unquote <- function(e) if (is.pairlist(e)) as.pairlist(lapply(e, unquote)) else if (length(e) <= 1) e else if (e[[1]] == as.name(".")) eval(e[[2]], where) else as.call(lapply(e, unquote)) unquote(substitute(expr)) }